BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018D12SP1|AL427319
(932 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1350 1751 0.0
>3x_Contig1350
Length = 6538
Score = 1751 bits (881), Expect = 0.0
Identities = 924/934 (98%), Gaps = 6/934 (0%)
Strand = Plus / Minus
Query: 2 tcgcagtctttggtaatgttctacttttagccaaaggtggccgcgt--cttttaacggct 59
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2827 tcgcagactttggtaatgttctacttttagccaaaggtggccgcgtagcttttaacggct 2768
Query: 60 atccatctgcaatgatcgagtatttcaataaagaaggattcacatgtcctcagttgacca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2767 atccatctgcaatgatcgagtatttcaataaagaaggattcacatgtcctcagttgacca 2708
Query: 120 atattgctgactaccttttagacgtaatatctgtgaacattcagaattatgagaacgaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2707 atattgctgactaccttttagacgtaatatctgtgaacattcagaattatgagaacgaag 2648
Query: 180 tctcttcgaaagagcgtgtgaatgcattaatagaaaaatggagagtgataagctccaaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2647 tctcttcgaaagagcgtgtgaatgcattaatagaaaaatggagagtgataagctccaaag 2588
Query: 240 atgttaggaacgtaaatcccaccatgacccactctgaatttacatccctatttgcccaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2587 atgttaggaacgtaaatcccaccatgacccactctgaatttacatccctatttgcccaac 2528
Query: 300 atatccgtcatcatgcttctgtactggtagcatacaaagtatgcttgtcgcgtcaattta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2527 atatccgtcatcatgcttctgtactggtagcatacaaagtatgcttgtcgcgtcaattta 2468
Query: 360 aagtgatgacaagaaacattgattcttgtttcgctaggttagcccaagttcctggaatgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2467 aagtgatgacaagaaacattgattcttgtttcgctaggttagcccaagttcctggaatgg 2408
Query: 420 cagctattttmaccatctactttgccccactcaagaacaatttcactggtgttatgaatc 479
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2407 cagctattttaaccatctactttgccccactcaagaacaatttcactggtgttatgaatc 2348
Query: 480 ggttaggactaacccaacaatacacatctctatacttttgtggcatgcttttgaaccttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2347 ggttaggactaacccaacaatacacatctctatacttttgtggcatgcttttgaaccttg 2288
Query: 540 cagtttatcctgcggaaagggataatttctatcaggagtttcatgataacatatatggca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2287 cagtttatcctgcggaaagggataatttctatcaggagtttcatgataacatatatggca 2228
Query: 600 ttggcccattcctgtgtgcttacatgactttggagtttccaatggctgtcttatccgcta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2227 ttggcccattcctgtgtgcttacatgactttggagtttccaatggctgtcttatccgcta 2168
Query: 660 tcctattttcagttttaactgtgatgggaatcggactaccacgaactgctcaaatgcttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2167 tcctattttcagttttaactgtgatgggaatcggactaccacgaactgctcaaatgcttt 2108
Query: 720 tcatttcaatgtattgttcattcataataacaacgtgtggcgaggcttgggggatagtag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2107 tcatttcaatgtattgttcattcataataacaacgtgtggcgaggcttgggggatagtag 2048
Query: 780 tc-acactcttttcaatagaccagggtttgttg-twacgttgtttcaattatattatcta 837
|| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 2047 tcaacactcttttcaatagaccagggtttgttgttaacgttgtttcaattatattatcta 1988
Query: 838 tvagctctattatgagtggcattttgtcattgaatatgcctaaattttgg-aaggtttga 896
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1987 taagctctattatgagtggcattttgtcattgaatatgcctaaattttggaaaggtttga 1928
Query: 897 actatgttagtcccgt-cattacacaagtatgat 929
|||||||||||||||| |||||||||||||||||
Sbjct: 1927 actatgttagtcccgtccattacacaagtatgat 1894
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5984
Number of Sequences: 1807
Number of extensions: 5984
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)